Post by asgr on Sept 19, 2017 9:27:38 GMT 8
Hi All,
Whilst working on the paper to accompany ProFound I’ve made a number of changes and additions to the code (mostly the latter). However, it has mostly been smooth progress, and I’m aiming to submit it in the next few weeks if possible.
The main thing is that as of today the functions moved over to ProFound have been deleted from ProFit and are now fully deprecated. The full list (where you should mentally replace “profound” with “profit” to see which functions have been removed from ProFit) is below:
plot.profound
ProFound Diagnostic Grid
profound ProFound Source Detection
profoundDrawEllipse Draw Ellipse
profoundFlux2Mag Convert between fluxes and magnitudes.
profoundFlux2SB Convert between fluxes and magnitudes.
profoundGainConvert Convert gain between mag-zero points
profoundGainEst Image Gain Estimator
profoundGetEllipse Calculate single annulus properties of an iso-photal ellipse
profoundGetEllipses Calculate multiple annulus properties of iso-photal ellipses
profoundGetEllipsesPlot Create diagnostic plot of estimated iso-photal ellipses
profoundGetPixScale Get Pixel Scale
profoundImBlur Image Transformations
profoundImDiff Image Transformations
profoundImGrad Image Transformations
profoundInterp2d 2D image interpolation
profoundMag2Flux Convert between fluxes and magnitudes.
profoundMag2Mu Magnitude to Surface Brightness Conversions
profoundMakeSegim Watershed Image Segmentation
profoundMakeSegimDilate Segmentation Map Expansion and Dilation
profoundMakeSegimExpand Segmentation Map Expansion and Dilation
profoundMakeSegimPropagate
Propagate Identified Segments
profoundMakeSigma Make a Sigma Map
profoundMakeSkyGrid Calculate Sky Maps
profoundMakeSkyMap Calculate Sky Maps
profoundMakeStack Stack Images
profoundMu2Mag Magnitude to Surface Brightness Conversions
profoundPixelCorrelation Pixel to pixel correlation statistics
profoundProFound ProFound Source Detection
profoundSB2Flux Convert between fluxes and magnitudes.
profoundSegimGroup Create Segmentation Groups
profoundSegimMerge Merge Segmentation Maps
profoundSegimNear Segment Neighbour IDs
profoundSegimPlot Image Segmentation Statistics
profoundSegimStats Image Segmentation Statistics
profoundSkyEst Local Sky Estimator
profoundSkyEstLoc Calculate Sky in Subest
A couple of new features have been added:
plot.profound generic diagnostic plot for profound objects, you can display this by running plot(profound) where “profound” is the output from profoundProFound. Feedback welcome on the diagnostics shown, but this seemed like a useful set.
profoundSegimGroup identifies groups of segments that are touching each other, i.e. this might be useful when looking for objects that might beed to be fit simultaneously with ProFit.
profoundSegimMerge merge segmentation maps, which might be important when trying to mask out bright sources embedded deeply inside an extended object.
Stuff on the ProFit side is much the same, except for the removal of the above functions and the simplification of the dependencies (which is always nice).
As a reminder you can install to the latest versions by running the below:
library(devtools)
install_github('asgr/ProFound’)
install_github(‘ICRAR/ProFit')
library(ProFound)
library(ProFit)
All the vignettes at rpubs.com/asgr/ have been updated to run correctly with the latest versions of both ProFit and ProFound.
Other news is that ProFound has now been successfully run on all of the DEVILS fields by Luke, and so far we are happy with how things look and the quality of the star galaxy separation. The KIDS and VIKING data is next to be processed in preparation for WAVES.
Cheers,
Aaron
Whilst working on the paper to accompany ProFound I’ve made a number of changes and additions to the code (mostly the latter). However, it has mostly been smooth progress, and I’m aiming to submit it in the next few weeks if possible.
The main thing is that as of today the functions moved over to ProFound have been deleted from ProFit and are now fully deprecated. The full list (where you should mentally replace “profound” with “profit” to see which functions have been removed from ProFit) is below:
plot.profound
ProFound Diagnostic Grid
profound ProFound Source Detection
profoundDrawEllipse Draw Ellipse
profoundFlux2Mag Convert between fluxes and magnitudes.
profoundFlux2SB Convert between fluxes and magnitudes.
profoundGainConvert Convert gain between mag-zero points
profoundGainEst Image Gain Estimator
profoundGetEllipse Calculate single annulus properties of an iso-photal ellipse
profoundGetEllipses Calculate multiple annulus properties of iso-photal ellipses
profoundGetEllipsesPlot Create diagnostic plot of estimated iso-photal ellipses
profoundGetPixScale Get Pixel Scale
profoundImBlur Image Transformations
profoundImDiff Image Transformations
profoundImGrad Image Transformations
profoundInterp2d 2D image interpolation
profoundMag2Flux Convert between fluxes and magnitudes.
profoundMag2Mu Magnitude to Surface Brightness Conversions
profoundMakeSegim Watershed Image Segmentation
profoundMakeSegimDilate Segmentation Map Expansion and Dilation
profoundMakeSegimExpand Segmentation Map Expansion and Dilation
profoundMakeSegimPropagate
Propagate Identified Segments
profoundMakeSigma Make a Sigma Map
profoundMakeSkyGrid Calculate Sky Maps
profoundMakeSkyMap Calculate Sky Maps
profoundMakeStack Stack Images
profoundMu2Mag Magnitude to Surface Brightness Conversions
profoundPixelCorrelation Pixel to pixel correlation statistics
profoundProFound ProFound Source Detection
profoundSB2Flux Convert between fluxes and magnitudes.
profoundSegimGroup Create Segmentation Groups
profoundSegimMerge Merge Segmentation Maps
profoundSegimNear Segment Neighbour IDs
profoundSegimPlot Image Segmentation Statistics
profoundSegimStats Image Segmentation Statistics
profoundSkyEst Local Sky Estimator
profoundSkyEstLoc Calculate Sky in Subest
A couple of new features have been added:
plot.profound generic diagnostic plot for profound objects, you can display this by running plot(profound) where “profound” is the output from profoundProFound. Feedback welcome on the diagnostics shown, but this seemed like a useful set.
profoundSegimGroup identifies groups of segments that are touching each other, i.e. this might be useful when looking for objects that might beed to be fit simultaneously with ProFit.
profoundSegimMerge merge segmentation maps, which might be important when trying to mask out bright sources embedded deeply inside an extended object.
Stuff on the ProFit side is much the same, except for the removal of the above functions and the simplification of the dependencies (which is always nice).
As a reminder you can install to the latest versions by running the below:
library(devtools)
install_github('asgr/ProFound’)
install_github(‘ICRAR/ProFit')
library(ProFound)
library(ProFit)
All the vignettes at rpubs.com/asgr/ have been updated to run correctly with the latest versions of both ProFit and ProFound.
Other news is that ProFound has now been successfully run on all of the DEVILS fields by Luke, and so far we are happy with how things look and the quality of the star galaxy separation. The KIDS and VIKING data is next to be processed in preparation for WAVES.
Cheers,
Aaron